HL_6BZ8_205

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

6BZ8|1|YA|G|2250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ8_205 not in the Motif Atlas

Homologous match to HL_7A0S_052

Geometric discrepancy: 0.1054

The information below is about HL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_85367.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

6BZ8|1|YA|C|2248
6BZ8|1|YA|U|2249
6BZ8|1|YA|G|2250
6BZ8|1|YA|G|2251
6BZ8|1|YA|G|2252
6BZ8|1|YA|G|2253
6BZ8|1|YA|C|2254
6BZ8|1|YA|G|2255
6BZ8|1|YA|G|2256

Current chains

Chain YA

23S rRNA

Nearby chains

Chain XV

Transfer RNA; tRNA

Chain Y0

50S ribosomal protein L27

Chain YQ

50S ribosomal protein L16