HL_6CAS_025
3D structure
- PDB id
- 6CAS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Serial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with N1MS
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GUUAAGUC
- Length
- 8 nucleotides
- Bulged bases
- 6CAS|1|A|G|1094
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6CAS_025 not in the Motif Atlas
- Homologous match to HL_4LFB_025
- Geometric discrepancy: 0.0979
- The information below is about HL_4LFB_025
- Detailed Annotation
- T-loop related
- Broad Annotation
- T-loop
- Motif group
- HL_63894.1
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 18
Unit IDs
6CAS|1|A|G|1089
6CAS|1|A|U|1090
6CAS|1|A|U|1091
6CAS|1|A|A|1092
6CAS|1|A|A|1093
6CAS|1|A|G|1094
6CAS|1|A|U|1095
6CAS|1|A|C|1096
Current chains
- Chain A
- 16S Ribosomal RNA rRNA
Nearby chains
- Chain B
- 30S ribosomal protein S2
- Chain G
- 30S ribosomal protein S7
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