HL_6CB1_029
3D structure
- PDB id
- 6CB1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast nucleolar pre-60S ribosomal subunit (state 3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- CCGUG
- Length
- 5 nucleotides
- Bulged bases
- 6CB1|1|1|C|1793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6CB1_029 not in the Motif Atlas
- Homologous match to HL_5TBW_040
- Geometric discrepancy: 0.1474
- The information below is about HL_5TBW_040
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_43793.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 50
Unit IDs
6CB1|1|1|C|1792
6CB1|1|1|C|1793
6CB1|1|1|G|1794
6CB1|1|1|U|1795
6CB1|1|1|G|1796
Current chains
- Chain 1
- 35S pre-ribosomal RNA miscRNA
Nearby chains
No other chains within 10ÅColoring options: