HL_6CZR_001
3D structure
- PDB id
- 6CZR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of amicetin bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.14 Å
Loop
- Sequence
- UGGCUACCUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6CZR_001 not in the Motif Atlas
- Homologous match to HL_7RQB_001
- Geometric discrepancy: 0.1276
- The information below is about HL_7RQB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_99167.2
- Basepair signature
- cWW-F-F-cSH-F-F
- Number of instances in this motif group
- 6
Unit IDs
6CZR|1|1A|U|57
6CZR|1|1A|G|58
6CZR|1|1A|G|59
6CZR|1|1A|C|60
6CZR|1|1A|U|61
6CZR|1|1A|A|62
6CZR|1|1A|C|63
6CZR|1|1A|C|64
6CZR|1|1A|U|65
6CZR|1|1A|G|66
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 12
- 50S ribosomal protein L29
- Chain 17
- 50S ribosomal protein L34
- Chain 1X
- 50S ribosomal protein L23
Coloring options: