HL_6CZR_010

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

UUGGGAAG

Length

8 nucleotides

Bulged bases

6CZR|1|1A|A|334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6CZR_010 not in the Motif Atlas

Homologous match to HL_7RQB_010

Geometric discrepancy: 0.1026

The information below is about HL_7RQB_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41998.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

69

Unit IDs

6CZR|1|1A|U|328
6CZR|1|1A|U|329
6CZR|1|1A|G|330
6CZR|1|1A|G|331
6CZR|1|1A|G|332
6CZR|1|1A|A|333
6CZR|1|1A|A|334
6CZR|1|1A|G|335

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1Y

50S ribosomal protein L24