HL_6CZR_031

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

GGAUGAC

Length

7 nucleotides

Bulged bases

6CZR|1|1A|U|1219, 6CZR|1|1A|G|1220, 6CZR|1|1A|A|1221

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6CZR_031 not in the Motif Atlas

Homologous match to HL_7RQB_031

Geometric discrepancy: 0.3489

The information below is about HL_7RQB_031

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_94651.3

Basepair signature

cWW-tSS

Number of instances in this motif group

6

Unit IDs

6CZR|1|1A|G|1216
6CZR|1|1A|G|1217
6CZR|1|1A|A|1218
6CZR|1|1A|U|1219
6CZR|1|1A|G|1220
6CZR|1|1A|A|1221
6CZR|1|1A|C|1222

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains