HL_6CZR_043

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

UGAUGAG

Length

7 nucleotides

Bulged bases

6CZR|1|1A|U|1767

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6CZR_043 not in the Motif Atlas

Homologous match to HL_7RQB_043

Geometric discrepancy: 0.16

The information below is about HL_7RQB_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43656.2

Basepair signature

cWW-tSH

Number of instances in this motif group

8

Unit IDs

6CZR|1|1A|U|1764
6CZR|1|1A|G|1765
6CZR|1|1A|A|1766
6CZR|1|1A|U|1767
6CZR|1|1A|G|1768
6CZR|1|1A|A|1769
6CZR|1|1A|G|1770

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains