HL_6CZR_045
3D structure
- PDB id
- 6CZR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of amicetin bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.14 Å
Loop
- Sequence
- UUUACCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 6CZR|1|1A|A|1810, 6CZR|1|1A|C|1811, 6CZR|1|1A|C|1812, 6CZR|1|1A|A|1816
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6CZR_045 not in the Motif Atlas
- Homologous match to HL_5J7L_178
- Geometric discrepancy: 0.1193
- The information below is about HL_5J7L_178
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01962.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
6CZR|1|1A|U|1807
6CZR|1|1A|U|1808
6CZR|1|1A|U|1809
6CZR|1|1A|A|1810
6CZR|1|1A|C|1811
6CZR|1|1A|C|1812
6CZR|1|1A|A|1813
6CZR|1|1A|A|1814
6CZR|1|1A|A|1815
6CZR|1|1A|A|1816
6CZR|1|1A|A|1817
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 17
- 50S ribosomal protein L34
- Chain 1D
- 50S ribosomal protein L2
- Chain 1W
- 50S ribosomal protein L22
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