HL_6CZR_121

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

CGUUGAG

Length

7 nucleotides

Bulged bases

6CZR|1|2A|G|638

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6CZR_121 not in the Motif Atlas

Homologous match to HL_7RQB_019

Geometric discrepancy: 0.1204

The information below is about HL_7RQB_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32369.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

6

Unit IDs

6CZR|1|2A|C|634
6CZR|1|2A|G|635
6CZR|1|2A|U|636
6CZR|1|2A|U|637
6CZR|1|2A|G|638
6CZR|1|2A|A|639
6CZR|1|2A|G|640

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2F

50S ribosomal protein L4