HL_6CZR_125
3D structure
- PDB id
- 6CZR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of amicetin bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.14 Å
Loop
- Sequence
- GGUGAGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6CZR_125 not in the Motif Atlas
- Homologous match to HL_7RQB_022
- Geometric discrepancy: 0.137
- The information below is about HL_7RQB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84085.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
6CZR|1|2A|G|758
6CZR|1|2A|G|759
6CZR|1|2A|U|760
6CZR|1|2A|G|761
6CZR|1|2A|A|762
6CZR|1|2A|G|763
6CZR|1|2A|A|764
6CZR|1|2A|C|765
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 2D
- 50S ribosomal protein L2
- Chain 2a
- Small subunit ribosomal RNA; SSU rRNA
- Chain 2o
- 30S ribosomal protein S15
- Chain 2q
- 30S ribosomal protein S17
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