HL_6CZR_202

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

GGCAAC

Length

6 nucleotides

Bulged bases

6CZR|1|2a|C|1249

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6CZR_202 not in the Motif Atlas

Homologous match to HL_5J7L_027

Geometric discrepancy: 0.2216

The information below is about HL_5J7L_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

6CZR|1|2a|G|1247
6CZR|1|2a|G|1248
6CZR|1|2a|C|1249
6CZR|1|2a|A|1250
6CZR|1|2a|A|1251
6CZR|1|2a|C|1252

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2m

30S ribosomal protein S13

Chain 2s

30S ribosomal protein S19

Chain 2u

30S ribosomal protein Thx