HL_6CZR_207

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

GCUUGUC

Length

7 nucleotides

Bulged bases

6CZR|1|1A|U|270, 6CZR|1|1A|U|273

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6CZR_207 not in the Motif Atlas

Homologous match to HL_9DFE_008

Geometric discrepancy: 0.1691

The information below is about HL_9DFE_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CZR|1|1A|G|268
6CZR|1|1A|C|269
6CZR|1|1A|U|270
6CZR|1|1A|U|271
6CZR|1|1A|G|272
6CZR|1|1A|U|273
6CZR|1|1A|C|274

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 11

50S ribosomal protein L28

Chain 1I

50S ribosomal protein L9