HL_6D90_131
3D structure
- PDB id
- 6D90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CCCGCGGCGGG
- Length
- 11 nucleotides
- Bulged bases
- 6D90|1|5|G|134, 6D90|1|5|G|135, 6D90|1|5|C|136
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6D90|1|5|C|129
6D90|1|5|C|130
6D90|1|5|C|131
6D90|1|5|G|132
6D90|1|5|C|133
6D90|1|5|G|134
6D90|1|5|G|135
6D90|1|5|C|136
6D90|1|5|G|137
6D90|1|5|G|138
6D90|1|5|G|139
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain N
- eL15
- Chain h
- eL35
- Chain j
- eL37
Coloring options: