HL_6D9J_018

3D structure

PDB id

6D9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6D9J|1|2|U|885
6D9J|1|2|A|886
6D9J|1|2|U|887
6D9J|1|2|U|888
6D9J|1|2|U|889
6D9J|1|2|U|890
6D9J|1|2|G|891
6D9J|1|2|U|892
6D9J|1|2|U|893
6D9J|1|2|G|894
6D9J|1|2|G|895
6D9J|1|2|U|896
6D9J|1|2|U|897
6D9J|1|2|U|898
6D9J|1|2|U|899
6D9J|1|2|C|900
6D9J|1|2|G|901

Current chains

Chain 2

18S rRNA

Nearby chains

Chain HH

eS6