HL_6D9J_056
3D structure
- PDB id
- 6D9J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAGACCCG
- Length
- 9 nucleotides
- Bulged bases
- 6D9J|1|5|A|966, 6D9J|1|5|C|967
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6D9J|1|5|C|962
6D9J|1|5|G|963
6D9J|1|5|A|964
6D9J|1|5|G|965
6D9J|1|5|A|966
6D9J|1|5|C|967
6D9J|1|5|C|968
6D9J|1|5|C|969
6D9J|1|5|G|970
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain E
- eL6
- Chain F
- uL30
Coloring options: