3D structure

PDB id
6DLR (explore in PDB, NAKB, or RNA 3D Hub)
Description
PRPP Riboswitch bound to PRPP, iridium-hexamine soaked structure
Experimental method
X-RAY DIFFRACTION
Resolution
2.66 Å

Loop

Sequence
GAUAGAAGC
Length
9 nucleotides
Bulged bases (A, C, G, U)
89G
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_69023.3
Basepair signature
cWW-tWH-F-F-F-F
Number of instances in this motif group
16

Unit IDs

6DLR|1|A|G|82
6DLR|1|A|A|83
6DLR|1|A|U|84
6DLR|1|A|A|85
6DLR|1|A|G|86
6DLR|1|A|A|87
6DLR|1|A|A|88
6DLR|1|A|G|89
6DLR|1|A|C|90

Current chains

Chain A
PRPP Riboswitch

Nearby chains

No other chains within 10Å

Coloring options:

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