HL_6DNC_058

3D structure

PDB id

6DNC (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

6DNC|1|B|U|1065, 6DNC|1|B|U|1066, 6DNC|1|B|A|1067, 6DNC|1|B|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DNC|1|B|C|1064
6DNC|1|B|U|1065
6DNC|1|B|U|1066
6DNC|1|B|A|1067
6DNC|1|B|G|1068
6DNC|1|B|A|1069
6DNC|1|B|A|1070
6DNC|1|B|G|1071
6DNC|1|B|C|1072
6DNC|1|B|A|1073
6DNC|1|B|G|1074

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L11

Chain MA

Peptide chain release factor 1

Chain Q

50S ribosomal protein L16