HL_6DNC_070
3D structure
- PDB id
- 6DNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CGACACAG
- Length
- 8 nucleotides
- Bulged bases
- 6DNC|1|B|A|1614, 6DNC|1|B|A|1616, 6DNC|1|B|A|1618
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6DNC_070 not in the Motif Atlas
- Homologous match to HL_4WF9_038
- Geometric discrepancy: 0.1591
- The information below is about HL_4WF9_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89567.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
6DNC|1|B|C|1612
6DNC|1|B|G|1613
6DNC|1|B|A|1614
6DNC|1|B|C|1615
6DNC|1|B|A|1616
6DNC|1|B|C|1617
6DNC|1|B|A|1618
6DNC|1|B|G|1619
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain HA
- 50S ribosomal protein L34
- Chain W
- 50S ribosomal protein L22
Coloring options: