HL_6DNC_114

3D structure

PDB id

6DNC (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUUA

Length

4 nucleotides

Bulged bases

6DNC|1|B|U|2797, 6DNC|1|B|U|2798

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6DNC_114 not in the Motif Atlas

Homologous match to HL_8B0X_094

Geometric discrepancy: 0.5737

The information below is about HL_8B0X_094

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01957.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

6DNC|1|B|U|2796
6DNC|1|B|U|2797
6DNC|1|B|U|2798
6DNC|1|B|A|2799

Current chains

Chain B

23S ribosomal RNA

Nearby chains