HL_6DZI_096
3D structure
- PDB id
- 6DZI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.46 Å
Loop
- Sequence
- GAUGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 6DZI|1|h|U|947, 6DZI|1|h|G|953
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6DZI_096 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.3328
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6DZI|1|h|G|945
6DZI|1|h|A|946
6DZI|1|h|U|947
6DZI|1|h|G|948
6DZI|1|h|C|949
6DZI|1|h|A|950
6DZI|1|h|A|951
6DZI|1|h|C|952
6DZI|1|h|G|953
6DZI|1|h|C|954
Current chains
- Chain h
- 16S rRNA
Nearby chains
- Chain 4
- 30S ribosomal protein S9
- Chain Y
- Ribosome hibernation promoting factor
- Chain s
- 30S ribosomal protein S10
- Chain v
- 30S ribosomal protein S13
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