HL_6DZI_099

3D structure

PDB id

6DZI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.46 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

6DZI|1|h|G|1074

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6DZI_099 not in the Motif Atlas

Homologous match to HL_6CZR_096

Geometric discrepancy: 0.2791

The information below is about HL_6CZR_096

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

24

Unit IDs

6DZI|1|h|G|1069
6DZI|1|h|U|1070
6DZI|1|h|U|1071
6DZI|1|h|A|1072
6DZI|1|h|A|1073
6DZI|1|h|G|1074
6DZI|1|h|U|1075
6DZI|1|h|C|1076

Current chains

Chain h

16S rRNA

Nearby chains

Chain 8

30S ribosomal protein S2

Chain p

30S ribosomal protein S7