HL_6E8S_001
3D structure
- PDB id
- 6E8S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the iMango-III aptamer bound to TO1-Biotin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.35 Å
Loop
- Sequence
- AGGAAGGAUUGGUAUGUGGUAUAU
- Length
- 24 nucleotides
- Bulged bases
- 6E8S|1|A|A|11, 6E8S|1|A|U|16
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35354.1
- Basepair signature
- cWW-cWH-cHW-F-cWH-cHW-F-F-tHH-cWH-tWW-cWH-F-tWW-cWH-F-cWH
- Number of instances in this motif group
- 1
Unit IDs
6E8S|1|A|A|8
6E8S|1|A|G|9
6E8S|1|A|G|10
6E8S|1|A|A|11
6E8S|1|A|A|12
6E8S|1|A|G|13
6E8S|1|A|G|14
6E8S|1|A|A|15
6E8S|1|A|U|16
6E8S|1|A|U|17
6E8S|1|A|G|18
6E8S|1|A|G|19
6E8S|1|A|U|20
6E8S|1|A|A|21
6E8S|1|A|U|22
6E8S|1|A|G|23
6E8S|1|A|U|24
6E8S|1|A|G|25
6E8S|1|A|G|26
6E8S|1|A|U|27
6E8S|1|A|A|28
6E8S|1|A|U|29
6E8S|1|A|A|30
6E8S|1|A|U|31
Current chains
- Chain A
- iMango-III aptamer
Nearby chains
- Chain B
- iMango-III aptamer
Coloring options: