HL_6EK0_014

3D structure

PDB id

6EK0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution cryo-EM structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UCCCGGCGCGCCGG

Length

14 nucleotides

Bulged bases

6EK0|1|L5|C|991

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6EK0|1|L5|U|989
6EK0|1|L5|C|990
6EK0|1|L5|C|991
6EK0|1|L5|C|992
6EK0|1|L5|G|993
6EK0|1|L5|G|994
6EK0|1|L5|C|995
6EK0|1|L5|G|996
6EK0|1|L5|C|1047
6EK0|1|L5|G|1048
6EK0|1|L5|C|1049
6EK0|1|L5|C|1050
6EK0|1|L5|G|1051
6EK0|1|L5|G|1064

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LE

60S ribosomal protein L6