HL_6EK0_032
3D structure
- PDB id
- 6EK0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution cryo-EM structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAGUCGAGAGUGGACGGGAGCGGCGGCCCGGAGCCCCGCGGACGCUACG
- Length
- 49 nucleotides
- Bulged bases
- 6EK0|1|L5|U|2097, 6EK0|1|L5|C|2255, 6EK0|1|L5|U|2267, 6EK0|1|L5|C|2269
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6EK0|1|L5|C|2087
6EK0|1|L5|A|2088
6EK0|1|L5|G|2089
6EK0|1|L5|U|2090
6EK0|1|L5|C|2091
6EK0|1|L5|G|2092
6EK0|1|L5|A|2093
6EK0|1|L5|G|2094
6EK0|1|L5|A|2095
6EK0|1|L5|G|2096
6EK0|1|L5|U|2097
6EK0|1|L5|G|2098
6EK0|1|L5|G|2099
6EK0|1|L5|A|2100
6EK0|1|L5|C|2101
6EK0|1|L5|G|2102
6EK0|1|L5|G|2103
6EK0|1|L5|G|2104
6EK0|1|L5|A|2105
6EK0|1|L5|G|2106
6EK0|1|L5|C|2107
6EK0|1|L5|G|2108
6EK0|1|L5|G|2109
6EK0|1|L5|C|2110
6EK0|1|L5|G|2111
6EK0|1|L5|G|2112
6EK0|1|L5|C|2113
6EK0|1|L5|C|2249
6EK0|1|L5|C|2250
6EK0|1|L5|G|2251
6EK0|1|L5|G|2252
6EK0|1|L5|A|2253
6EK0|1|L5|G|2254
6EK0|1|L5|C|2255
6EK0|1|L5|C|2256
6EK0|1|L5|C|2257
6EK0|1|L5|C|2258
6EK0|1|L5|G|2259
6EK0|1|L5|C|2260
6EK0|1|L5|G|2261
6EK0|1|L5|G|2262
6EK0|1|L5|A|2263
6EK0|1|L5|C|2264
6EK0|1|L5|G|2265
6EK0|1|L5|C|2266
6EK0|1|L5|U|2267
6EK0|1|L5|A|2268
6EK0|1|L5|C|2269
6EK0|1|L5|G|2270
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LE
- 60S ribosomal protein L6
- Chain LF
- 60S ribosomal protein L7
- Chain LQ
- 60S ribosomal protein L18
- Chain Lb
- 60S ribosomal protein L29
- Chain Lr
- 60S ribosomal protein L28
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