HL_6EK0_041
3D structure
- PDB id
- 6EK0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution cryo-EM structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUUCUCUUU
- Length
- 9 nucleotides
- Bulged bases
- 6EK0|1|L5|U|2631
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6EK0_041 not in the Motif Atlas
- Homologous match to HL_8C3A_037
- Geometric discrepancy: 0.1945
- The information below is about HL_8C3A_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6EK0|1|L5|G|2624
6EK0|1|L5|U|2625
6EK0|1|L5|U|2626
6EK0|1|L5|C|2627
6EK0|1|L5|U|2628
6EK0|1|L5|C|2629
6EK0|1|L5|U|2630
6EK0|1|L5|U|2631
6EK0|1|L5|U|2632
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LR
- 60S ribosomal protein L19
- Chain LU
- 60S ribosomal protein L22
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