HL_6EK0_096
3D structure
- PDB id
- 6EK0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution cryo-EM structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCUCGGCGGGGCCCGAA
- Length
- 17 nucleotides
- Bulged bases
- 6EK0|1|S2|G|786, 6EK0|1|S2|G|787, 6EK0|1|S2|G|788
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6EK0|1|S2|U|747
6EK0|1|S2|C|748
6EK0|1|S2|U|749
6EK0|1|S2|C|750
6EK0|1|S2|G|751
6EK0|1|S2|G|752
6EK0|1|S2|C|753
6EK0|1|S2|G|786
6EK0|1|S2|G|787
6EK0|1|S2|G|788
6EK0|1|S2|G|789
6EK0|1|S2|C|790
6EK0|1|S2|C|791
6EK0|1|S2|C|792
6EK0|1|S2|G|793
6EK0|1|S2|A|794
6EK0|1|S2|A|795
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SE
- 40S ribosomal protein S4, X isoform
- Chain SG
- 40S ribosomal protein S6
- Chain SH
- 40S ribosomal protein S7
- Chain SL
- 40S ribosomal protein S11
Coloring options: