HL_6EK0_099
3D structure
- PDB id
- 6EK0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution cryo-EM structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUUCUAUUUUGUUGGUUUUCGGAAC
- Length
- 25 nucleotides
- Bulged bases
- 6EK0|1|S2|G|891
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6EK0|1|S2|G|881
6EK0|1|S2|U|882
6EK0|1|S2|U|883
6EK0|1|S2|C|884
6EK0|1|S2|U|885
6EK0|1|S2|A|886
6EK0|1|S2|U|887
6EK0|1|S2|U|888
6EK0|1|S2|U|889
6EK0|1|S2|U|890
6EK0|1|S2|G|891
6EK0|1|S2|U|892
6EK0|1|S2|U|893
6EK0|1|S2|G|894
6EK0|1|S2|G|895
6EK0|1|S2|U|896
6EK0|1|S2|U|897
6EK0|1|S2|U|898
6EK0|1|S2|U|899
6EK0|1|S2|C|900
6EK0|1|S2|G|901
6EK0|1|S2|G|902
6EK0|1|S2|A|903
6EK0|1|S2|A|904
6EK0|1|S2|C|905
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain LR
- 60S ribosomal protein L19
- Chain SG
- 40S ribosomal protein S6
- Chain SH
- 40S ribosomal protein S7
- Chain SL
- 40S ribosomal protein S11
Coloring options: