HL_6EK0_115
3D structure
- PDB id
- 6EK0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution cryo-EM structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCCCCGCCGGGGUGCCCUGGCGGAGCGCGCGGAGCG*C
- Length
- 37 nucleotides
- Bulged bases
- 6EK0|1|S2|G|1760, 6EK0|1|S2|C|1774, 6EK0|1|S2|C|1783
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6EK0|1|S2|G|1749
6EK0|1|S2|C|1750
6EK0|1|S2|C|1751
6EK0|1|S2|C|1752
6EK0|1|S2|C|1753
6EK0|1|S2|G|1754
6EK0|1|S2|C|1755
6EK0|1|S2|C|1756
6EK0|1|S2|G|1757
6EK0|1|S2|G|1758
6EK0|1|S2|G|1759
6EK0|1|S2|G|1760
6EK0|1|S2|U|1761
6EK0|1|S2|G|1771
6EK0|1|S2|C|1772
6EK0|1|S2|C|1773
6EK0|1|S2|C|1774
6EK0|1|S2|U|1775
6EK0|1|S2|G|1776
6EK0|1|S2|G|1777
6EK0|1|S2|C|1778
6EK0|1|S2|G|1779
6EK0|1|S2|G|1780
6EK0|1|S2|A|1781
6EK0|1|S2|G|1782
6EK0|1|S2|C|1783
6EK0|1|S2|G|1784
6EK0|1|S2|C|1785
6EK0|1|S2|G|1777
6EK0|1|S2|C|1778
6EK0|1|S2|G|1779
6EK0|1|S2|G|1780
6EK0|1|S2|A|1781
6EK0|1|S2|G|1782
6EK0|1|S2|C|1783
6EK0|1|S2|G|1784
*
6EK0|1|S2|C|1785
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain LW
- 60S ribosomal protein L24
- Chain SG
- 40S ribosomal protein S6
Coloring options: