HL_6ELZ_056
3D structure
- PDB id
- 6ELZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UGAAUUGCAGAAUUCCGUGAA
- Length
- 21 nucleotides
- Bulged bases
- 6ELZ|1|2|U|82, 6ELZ|1|2|C|84, 6ELZ|1|2|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ELZ_056 not in the Motif Atlas
- Homologous match to HL_8P9A_187
- Geometric discrepancy: 0.57
- The information below is about HL_8P9A_187
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68571.1
- Basepair signature
- cWW-tSH-tHS-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6ELZ|1|2|U|69
6ELZ|1|2|G|70
6ELZ|1|2|A|71
6ELZ|1|2|A|72
6ELZ|1|2|U|73
6ELZ|1|2|U|74
6ELZ|1|2|G|75
6ELZ|1|2|C|76
6ELZ|1|2|A|77
6ELZ|1|2|G|78
6ELZ|1|2|A|79
6ELZ|1|2|A|80
6ELZ|1|2|U|81
6ELZ|1|2|U|82
6ELZ|1|2|C|83
6ELZ|1|2|C|84
6ELZ|1|2|G|85
6ELZ|1|2|U|86
6ELZ|1|2|G|87
6ELZ|1|2|A|88
6ELZ|1|2|A|89
Current chains
- Chain 2
- 5.8S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain Y
- 60S ribosomal protein L26-A
- Chain h
- 60S ribosomal protein L35-A
- Chain j
- 60S ribosomal protein L37-A
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