HL_6ENF_106

3D structure

PDB id

6ENF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

6ENF|1|A|U|2797, 6ENF|1|A|U|2798, 6ENF|1|A|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ENF_106 not in the Motif Atlas

Homologous match to HL_5J7L_200

Geometric discrepancy: 0.3994

The information below is about HL_5J7L_200

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

6ENF|1|A|C|2795
6ENF|1|A|U|2796
6ENF|1|A|U|2797
6ENF|1|A|U|2798
6ENF|1|A|A|2799
6ENF|1|A|A|2800
6ENF|1|A|G|2801

Current chains

Chain A

23S ribosomal RNA

Nearby chains