HL_6ENJ_014

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GACACGUGGUAUC

Length

13 nucleotides

Bulged bases

6ENJ|1|A|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ENJ_014 not in the Motif Atlas

Homologous match to HL_4WF9_013

Geometric discrepancy: 0.2753

The information below is about HL_4WF9_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69139.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6ENJ|1|A|G|381
6ENJ|1|A|A|382
6ENJ|1|A|C|383
6ENJ|1|A|A|384
6ENJ|1|A|C|385
6ENJ|1|A|G|386
6ENJ|1|A|U|387
6ENJ|1|A|G|388
6ENJ|1|A|G|389
6ENJ|1|A|U|390
6ENJ|1|A|A|391
6ENJ|1|A|U|392
6ENJ|1|A|C|393

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain X

50S ribosomal protein L28