HL_6ENJ_025

3D structure

PDB id

6ENJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUGAAAGGC

Length

9 nucleotides

Bulged bases

6ENJ|1|A|A|781, 6ENJ|1|A|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ENJ_025 not in the Motif Atlas

Geometric match to HL_6CF2_001

Geometric discrepancy: 0.2508

The information below is about HL_6CF2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87553.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6ENJ|1|A|G|778
6ENJ|1|A|U|779
6ENJ|1|A|G|780
6ENJ|1|A|A|781
6ENJ|1|A|A|782
6ENJ|1|A|A|783
6ENJ|1|A|G|784
6ENJ|1|A|G|785
6ENJ|1|A|C|786

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2