HL_6ENU_028

3D structure

PDB id

6ENU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACGCUUAUGCGUU

Length

14 nucleotides

Bulged bases

6ENU|1|A|A|1175, 6ENU|1|A|G|1179

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ENU_028 not in the Motif Atlas

Geometric match to HL_5TBW_226

Geometric discrepancy: 0.332

The information below is about HL_5TBW_226

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_59342.2

Basepair signature

cWW-F-F-F-F-cWW-F-F

Number of instances in this motif group

5

Unit IDs

6ENU|1|A|G|1168
6ENU|1|A|A|1169
6ENU|1|A|C|1170
6ENU|1|A|G|1171
6ENU|1|A|C|1172
6ENU|1|A|U|1173
6ENU|1|A|U|1174
6ENU|1|A|A|1175
6ENU|1|A|U|1176
6ENU|1|A|G|1177
6ENU|1|A|C|1178
6ENU|1|A|G|1179
6ENU|1|A|U|1180
6ENU|1|A|U|1181

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain R

50S ribosomal protein L21