3D structure

PDB id
6ENU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GGUAAGUUC
Length
9 nucleotides
Bulged bases
6ENU|1|A|U|1955
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6ENU_047 not in the Motif Atlas
Homologous match to HL_5J7L_182
Geometric discrepancy: 0.0914
The information below is about HL_5J7L_182
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_20167.2
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
10

Unit IDs

6ENU|1|A|G|1949
6ENU|1|A|G|1950
6ENU|1|A|U|1951
6ENU|1|A|A|1952
6ENU|1|A|A|1953
6ENU|1|A|G|1954
6ENU|1|A|U|1955
6ENU|1|A|U|1956
6ENU|1|A|C|1957

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain K
50S ribosomal protein L14
Chain a
Small subunit ribosomal RNA; SSU rRNA

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.0861 s