HL_6ENU_077

3D structure

PDB id

6ENU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ENU_077 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.0818

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6ENU|1|a|A|320
6ENU|1|a|A|321
6ENU|1|a|C|322
6ENU|1|a|U|323
6ENU|1|a|G|324
6ENU|1|a|A|325
6ENU|1|a|G|326
6ENU|1|a|A|327
6ENU|1|a|C|328
6ENU|1|a|A|329
6ENU|1|a|C|330
6ENU|1|a|G|331
6ENU|1|a|G|332
6ENU|1|a|U|333

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain t

30S ribosomal protein S20