HL_6ENU_105

3D structure

PDB id

6ENU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACACGUGGUAUC

Length

13 nucleotides

Bulged bases

6ENU|1|A|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ENU_105 not in the Motif Atlas

Homologous match to HL_4WF9_013

Geometric discrepancy: 0.2382

The information below is about HL_4WF9_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69139.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6ENU|1|A|G|381
6ENU|1|A|A|382
6ENU|1|A|C|383
6ENU|1|A|A|384
6ENU|1|A|C|385
6ENU|1|A|G|386
6ENU|1|A|U|387
6ENU|1|A|G|388
6ENU|1|A|G|389
6ENU|1|A|U|390
6ENU|1|A|A|391
6ENU|1|A|U|392
6ENU|1|A|C|393

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain X

50S ribosomal protein L28