HL_6ENU_111

3D structure

PDB id

6ENU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AAGUUAAUACCUU

Length

13 nucleotides

Bulged bases

6ENU|1|a|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ENU_111 not in the Motif Atlas

Geometric match to HL_5TBW_226

Geometric discrepancy: 0.3675

The information below is about HL_5TBW_226

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_59342.2

Basepair signature

cWW-F-F-F-F-cWW-F-F

Number of instances in this motif group

5

Unit IDs

6ENU|1|a|A|460
6ENU|1|a|A|461
6ENU|1|a|G|462
6ENU|1|a|U|463
6ENU|1|a|U|464
6ENU|1|a|A|465
6ENU|1|a|A|466
6ENU|1|a|U|467
6ENU|1|a|A|468
6ENU|1|a|C|469
6ENU|1|a|C|470
6ENU|1|a|U|471
6ENU|1|a|U|472

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S16