HL_6ERI_017

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGACCAGAC

Length

9 nucleotides

Bulged bases

6ERI|1|AA|A|555, 6ERI|1|AA|C|556, 6ERI|1|AA|G|559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ERI|1|AA|G|553
6ERI|1|AA|G|554
6ERI|1|AA|A|555
6ERI|1|AA|C|556
6ERI|1|AA|C|557
6ERI|1|AA|A|558
6ERI|1|AA|G|559
6ERI|1|AA|A|560
6ERI|1|AA|C|561

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AJ

50S ribosomal protein L13, chloroplastic

Chain AR

50S ribosomal protein L21, chloroplastic

Chain AS

50S ribosomal protein L22, chloroplastic