HL_6ERI_024

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGAAAUG

Length

7 nucleotides

Bulged bases

6ERI|1|AA|A|792, 6ERI|1|AA|U|795

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ERI_024 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.2819

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

6ERI|1|AA|U|790
6ERI|1|AA|G|791
6ERI|1|AA|A|792
6ERI|1|AA|A|793
6ERI|1|AA|A|794
6ERI|1|AA|U|795
6ERI|1|AA|G|796

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AC

50S ribosomal protein L2, chloroplastic