HL_6ERI_029
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAAACAGC
- Length
- 8 nucleotides
- Bulged bases
- 6ERI|1|AA|A|1008
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ERI_029 not in the Motif Atlas
- Homologous match to HL_5J7L_160
- Geometric discrepancy: 0.174
- The information below is about HL_5J7L_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_42998.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6ERI|1|AA|G|1006
6ERI|1|AA|A|1007
6ERI|1|AA|A|1008
6ERI|1|AA|A|1009
6ERI|1|AA|C|1010
6ERI|1|AA|A|1011
6ERI|1|AA|G|1012
6ERI|1|AA|C|1013
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AQ
- 50S ribosomal protein L20, chloroplastic
- Chain AR
- 50S ribosomal protein L21, chloroplastic
- Chain Af
- 50S ribosomal protein 6, chloroplastic
- Chain Ax
- 5S ribosomal RNA; 5S rRNA
Coloring options: