HL_6ERI_032

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UAAAAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ERI_032 not in the Motif Atlas

Geometric match to HL_6UFG_001

Geometric discrepancy: 0.2615

The information below is about HL_6UFG_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_17440.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

6ERI|1|AA|U|1195
6ERI|1|AA|A|1196
6ERI|1|AA|A|1197
6ERI|1|AA|A|1198
6ERI|1|AA|A|1199
6ERI|1|AA|A|1200
6ERI|1|AA|A|1201
6ERI|1|AA|A|1202

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AR

50S ribosomal protein L21, chloroplastic

Chain AW

50S ribosomal protein L27, chloroplastic