HL_6ERI_036

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ERI_036 not in the Motif Atlas

Homologous match to HL_4WF9_034

Geometric discrepancy: 0.1474

The information below is about HL_4WF9_034

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

6ERI|1|AA|C|1384
6ERI|1|AA|G|1385
6ERI|1|AA|A|1386
6ERI|1|AA|A|1387
6ERI|1|AA|A|1388
6ERI|1|AA|G|1389

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AX

50S ribosomal protein L28, chloroplastic

Chain Ac

50S ribosomal protein L34, chloroplastic