HL_6ERI_044

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

6ERI|1|AA|U|1729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ERI_044 not in the Motif Atlas

Geometric match to HL_4V9F_044

Geometric discrepancy: 0.0947

The information below is about HL_4V9F_044

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

63

Unit IDs

6ERI|1|AA|C|1727
6ERI|1|AA|U|1728
6ERI|1|AA|U|1729
6ERI|1|AA|C|1730
6ERI|1|AA|G|1731
6ERI|1|AA|G|1732

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain BA

Small subunit ribosomal RNA; SSU rRNA