HL_6ERI_046

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ERI_046 not in the Motif Atlas

Homologous match to HL_7RQB_044

Geometric discrepancy: 0.1181

The information below is about HL_7RQB_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76539.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

6ERI|1|AA|C|1762
6ERI|1|AA|G|1763
6ERI|1|AA|A|1764
6ERI|1|AA|A|1765
6ERI|1|AA|G|1766

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AB

4.5S ribosomal RNA

Chain AP

50S ribosomal protein L19, chloroplastic