HL_6ERI_066

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ERI_066 not in the Motif Atlas

Homologous match to HL_7RQB_064

Geometric discrepancy: 0.1092

The information below is about HL_7RQB_064

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

6ERI|1|AA|C|2675
6ERI|1|AA|G|2676
6ERI|1|AA|A|2677
6ERI|1|AA|G|2678
6ERI|1|AA|A|2679
6ERI|1|AA|G|2680

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AG

50S ribosomal protein L6, chloroplastic