HL_6ERI_071
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAUCCCG
- Length
- 7 nucleotides
- Bulged bases
- 6ERI|1|Ax|C|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ERI_071 not in the Motif Atlas
- Geometric match to HL_7RQB_070
- Geometric discrepancy: 0.0867
- The information below is about HL_7RQB_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87939.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
6ERI|1|Ax|C|38
6ERI|1|Ax|A|39
6ERI|1|Ax|U|40
6ERI|1|Ax|C|41
6ERI|1|Ax|C|42
6ERI|1|Ax|C|43
6ERI|1|Ax|G|44
Current chains
- Chain Ax
- 5S ribosomal RNA
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain AF
- 50S ribosomal protein L5, chloroplastic
- Chain AO
- 50S ribosomal protein L18, chloroplastic
- Chain AZ
- 50S ribosomal protein L31, chloroplastic
Coloring options: