HL_6FRK_055
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CGCGGCG
- Length
- 7 nucleotides
- Bulged bases
- 6FRK|1|5|C|3673
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6FRK_055 not in the Motif Atlas
- Homologous match to HL_8C3A_047
- Geometric discrepancy: 0.237
- The information below is about HL_8C3A_047
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
6FRK|1|5|C|3668
6FRK|1|5|G|3669
6FRK|1|5|C|3670
6FRK|1|5|G|3671
6FRK|1|5|G|3672
6FRK|1|5|C|3673
6FRK|1|5|G|3674
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain A
- Ribosomal protein L8
- Chain N
- Ribosomal protein L15
Coloring options: