HL_6FRK_056
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AGAAAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6FRK_056 not in the Motif Atlas
- Homologous match to HL_8C3A_048
- Geometric discrepancy: 0.1898
- The information below is about HL_8C3A_048
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
6FRK|1|5|A|3724
6FRK|1|5|G|3725
6FRK|1|5|A|3726
6FRK|1|5|A|3727
6FRK|1|5|A|3728
6FRK|1|5|U|3729
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain i
- Ribosomal protein eL36
- Chain o
- Ribosomal protein eL42
Coloring options: