HL_6FT6_055
3D structure
- PDB id
- 6FT6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UUAAACGAUAACG
- Length
- 13 nucleotides
- Bulged bases
- 6FT6|1|1|A|2637, 6FT6|1|1|C|2644
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6FT6_055 not in the Motif Atlas
- Homologous match to HL_5TBW_055
- Geometric discrepancy: 0.3424
- The information below is about HL_5TBW_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19870.9
- Basepair signature
- cWW-tHH-cWW-tHS-F-F-tWW
- Number of instances in this motif group
- 8
Unit IDs
6FT6|1|1|U|2633
6FT6|1|1|U|2634
6FT6|1|1|A|2635
6FT6|1|1|A|2636
6FT6|1|1|A|2637
6FT6|1|1|C|2638
6FT6|1|1|G|2639
6FT6|1|1|A|2640
6FT6|1|1|U|2641
6FT6|1|1|A|2642
6FT6|1|1|A|2643
6FT6|1|1|C|2644
6FT6|1|1|G|2645
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain v
- Ribosome biogenesis protein RPF2
- Chain w
- Regulator of ribosome biosynthesis
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