HL_6FTG_004
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- CGCGGCG
- Length
- 7 nucleotides
- Bulged bases
- 6FTG|1|u|G|134, 6FTG|1|u|G|135
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6FTG_004 not in the Motif Atlas
- Geometric match to HL_4WF9_003
- Geometric discrepancy: 0.1393
- The information below is about HL_4WF9_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.6
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 21
Unit IDs
6FTG|1|u|C|131
6FTG|1|u|G|132
6FTG|1|u|C|133
6FTG|1|u|G|134
6FTG|1|u|G|135
6FTG|1|u|C|136
6FTG|1|u|G|137
Current chains
- Chain u
- 28S ribosomal RNA
Nearby chains
- Chain N
- Ribosomal protein L15
- Chain h
- eL29
- Chain j
- Ribosomal protein L37
- Chain w
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: